WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00076072 Genotype  Punc-54::a-syn::gfp, Punc-54::tor-2
Remark  RNAi treatment caused no lethality or enhanced aggregation of a-syn.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001023 dnj-5 C04A2.7 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04A2.7d C04A2.7d 2607   II: 6854190-6854265
CDS:C04A2.7a C04A2.7a 2748   II: 6853884-6853990
CDS:C04A2.7b C04A2.7b 2550   II: 6854829-6854847
CDS:C04A2.7c C04A2.7c 2739   II: 6853884-6853990

1 Laboratories

Primary Identifier
UA

0 Phenotype

3 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001405 protein aggregation variant Variations that result in the accumulation of soluble/insoluble protein aggregates in a particular cell or tissue, compared to control. Protein aggregates are often formed by interactions between misfolded protein molecules and/or deficiencies in proper protein folding.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031384

0 Strain