WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00067093 Genotype  let-23(n1045)
Phenotype Remark  The Phenotype reported is relevant to the genetic interaction observed. It it NOT a Phenotype induced by RNAi alone. Remark  To systematically test for genetic interactions between query-target pairs, worms harboring a weak loss-of-function mutation in a query gene were targeted for RNAi-mediated reduction of function in a second (target) gene by feeding the appropriate dsRNA. 11 query genes and 858 target genes were tested.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000894 dab-1 M110.5 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M110.5b M110.5b 1479   II: 8226330-8226438
CDS:M110.5d M110.5d 1479   II: 8226330-8226438
CDS:M110.5e M110.5e 1485   II: 8226330-8226438
CDS:M110.5c M110.5c 1425   II: 8226841-8226901
CDS:M110.5a M110.5a 1473   II: 8226330-8226438
CDS:M110.5f M110.5f 1431   II: 8226841-8226901
CDS:M110.5g M110.5g 1437   II: 8226841-8226901
CDS:M110.5h M110.5h 1431   II: 8226841-8226901

1 Laboratories

Primary Identifier
RP

1 Phenotype

Identifier Name Description
WBPhenotype:0000531 organism development variant Any variation in the progression of a worm at any time from its fertilization to adulthood compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031036

0 Strain