WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00067380 Genotype  bar-1(ga80)
Phenotype Remark  The Phenotype reported is relevant to the genetic interaction observed. It it NOT a Phenotype induced by RNAi alone. Remark  To systematically test for genetic interactions between query-target pairs, worms harboring a weak loss-of-function mutation in a query gene were targeted for RNAi-mediated reduction of function in a second (target) gene by feeding the appropriate dsRNA. 11 query genes and 858 target genes were tested.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004036 plc-1 F31B12.1 Caenorhabditis elegans

12 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1c F31B12.1c 5688   X: 10795070-10795207
CDS:F31B12.1b F31B12.1b 5607   X: 10796447-10796655
CDS:F31B12.1h F31B12.1h 10515   X: 10796447-10796655
CDS:F31B12.1j F31B12.1j 10464   X: 10796447-10796655
CDS:F31B12.1l F31B12.1l 10494   X: 10796447-10796655
CDS:F31B12.1a F31B12.1a 5697   X: 10795950-10796051
CDS:F31B12.1d F31B12.1d 10656   X: 10796447-10796655
CDS:F31B12.1e F31B12.1e 5637   X: 10796447-10796655
CDS:F31B12.1f F31B12.1f 5661   X: 10796447-10796655
CDS:F31B12.1g F31B12.1g 10485   X: 10796447-10796655
CDS:F31B12.1i F31B12.1i 10635   X: 10796447-10796655
CDS:F31B12.1k F31B12.1k 10665   X: 10796447-10796655

1 Laboratories

Primary Identifier
RP

1 Phenotype

Identifier Name Description
WBPhenotype:0000531 organism development variant Any variation in the progression of a worm at any time from its fertilization to adulthood compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031036

0 Strain