WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00067709 Genotype  glp-1(or178)
Phenotype Remark  The Phenotype reported is relevant to the genetic interaction observed. It it NOT a Phenotype induced by RNAi alone. Remark  To systematically test for genetic interactions between query-target pairs, worms harboring a weak loss-of-function mutation in a query gene were targeted for RNAi-mediated reduction of function in a second (target) gene by feeding the appropriate dsRNA. 11 query genes and 858 target genes were tested.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003015 lin-29 W03C9.4 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03C9.4a W03C9.4a 1374   II: 11918339-11918546
CDS:W03C9.4b W03C9.4b 1368   II: 11918339-11918546
CDS:W03C9.4e W03C9.4e 1362   II: 11918339-11918546
CDS:W03C9.4f W03C9.4f 1365   II: 11918339-11918546
CDS:W03C9.4g W03C9.4g 1371   II: 11918339-11918546
CDS:W03C9.4h W03C9.4h 1377   II: 11918339-11918546
CDS:W03C9.4i W03C9.4i 1383   II: 11918339-11918546
CDS:W03C9.4d W03C9.4d 1356   II: 11918339-11918546

1 Laboratories

Primary Identifier
RP

1 Phenotype

Identifier Name Description
WBPhenotype:0000531 organism development variant Any variation in the progression of a worm at any time from its fertilization to adulthood compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031036

0 Strain