WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00000642 Remark  yk225d3
Secondary Identifier  SA:yk225d3

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans

12 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8l W06H8.8l 23532   V: 6121577-6121636
CDS:W06H8.8h W06H8.8h 45522   V: 6121577-6121636
CDS:W06H8.8a W06H8.8a 45483   V: 6121593-6121636
CDS:W06H8.8d W06H8.8d 45438   V: 6121593-6121636
CDS:W06H8.8m W06H8.8m 23493   V: 6121593-6121636
CDS:W06H8.8n W06H8.8n 23448   V: 6121593-6121636
CDS:W06H8.8b W06H8.8b 44205   V: 6121593-6121636
CDS:W06H8.8e W06H8.8e 44160   V: 6121593-6121636
CDS:W06H8.8f W06H8.8f 45567   V: 6121577-6121636
CDS:W06H8.8g W06H8.8g 44289   V: 6121577-6121636
CDS:W06H8.8i W06H8.8i 44244   V: 6121577-6121636
CDS:W06H8.8k W06H8.8k 23577   V: 6121577-6121636

2 Laboratories

Primary Identifier
SA
YK

0 Phenotype

5 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain