WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00000854 Remark  yk253h11
Secondary Identifier  SA:yk253h11
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016269 C30G4.4 C30G4.4 Caenorhabditis elegans

19 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30G4.4a C30G4.4a 1035   X: 17057163-17057238
CDS:C30G4.4s C30G4.4s 171   X: 17057163-17057238
CDS:C30G4.4r C30G4.4r 270   X: 17057163-17057238
CDS:C30G4.4i C30G4.4i 702   X: 17057163-17057238
CDS:C30G4.4k C30G4.4k 741   X: 17057163-17057238
CDS:C30G4.4l C30G4.4l 663   X: 17057163-17057238
CDS:C30G4.4m C30G4.4m 675   X: 17057163-17057238
CDS:C30G4.4n C30G4.4n 597   X: 17057163-17057238
CDS:C30G4.4p C30G4.4p 636   X: 17057163-17057238
CDS:C30G4.4c C30G4.4c 1074   X: 17057163-17057238
CDS:C30G4.4d C30G4.4d 996   X: 17057163-17057238
CDS:C30G4.4f C30G4.4f 930   X: 17057163-17057238
CDS:C30G4.4h C30G4.4h 969   X: 17057163-17057238
CDS:C30G4.4b C30G4.4b 957   X: 17057163-17057238
CDS:C30G4.4e C30G4.4e 1008   X: 17057163-17057238
CDS:C30G4.4g C30G4.4g 1047   X: 17057163-17057238
CDS:C30G4.4j C30G4.4j 624   X: 17057163-17057238
CDS:C30G4.4o C30G4.4o 714   X: 17057163-17057238
CDS:C30G4.4q C30G4.4q 297   X: 17057163-17057238

2 Laboratories

Primary Identifier
SA
YK

0 Phenotype

5 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain