WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00002138 Remark  yk378b9
Secondary Identifier  SA:yk378b9

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004894 sms-3 Y22D7AL.8 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y22D7AL.8e Y22D7AL.8e 507   III: 1583469-1583501
CDS:Y22D7AL.8a Y22D7AL.8a 1023   III: 1583469-1583501
CDS:Y22D7AL.8b Y22D7AL.8b 1278   III: 1583469-1583501
CDS:Y22D7AL.8c Y22D7AL.8c 1083   III: 1583469-1583501
CDS:Y22D7AL.8d Y22D7AL.8d 1125   III: 1583469-1583501

2 Laboratories

Primary Identifier
SA
YK

0 Phenotype

5 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain