WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00002392 Remark  yk396d1
Secondary Identifier  SA:yk396d1

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

5 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017069 timm-17B.2 D2096.1 Caenorhabditis elegans
WBGene00017078 D2096.11 D2096.11 Caenorhabditis elegans
WBGene00019792 M116.5 M116.5 Caenorhabditis elegans
WBGene00019791 sdz-25 M116.4 Caenorhabditis elegans
WBGene00019788 M116.1 M116.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2096.11 D2096.11 2184   IV: 8389147-8389381
CDS:D2096.1a D2096.1a 423   IV: 8396648-8396821
CDS:D2096.1b D2096.1b 249   IV: 8397547-8397784
CDS:M116.4 M116.4 990   IV: 8405022-8405919
CDS:M116.1 M116.1 990   IV: 8410578-8410669

2 Laboratories

Primary Identifier
SA
YK

0 Phenotype

5 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain