WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00038958 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001177 egl-8 B0348.4 Caenorhabditis elegans

24 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0348.4b B0348.4b 4296   V: 21007-21090
CDS:B0348.4f B0348.4f 4221   V: 21007-21090
CDS:B0348.4h B0348.4h 3978   V: 21007-21090
CDS:B0348.4j B0348.4j 4041   V: 21007-21090
CDS:B0348.4k B0348.4k 4005   V: 21007-21090
CDS:B0348.4m B0348.4m 3762   V: 21007-21090
CDS:B0348.4n B0348.4n 4455   V: 21007-21090
CDS:B0348.4u B0348.4u 3858   V: 21007-21090
CDS:B0348.4v B0348.4v 3957   V: 21007-21090
CDS:B0348.4r B0348.4r 4137   V: 21007-21090
CDS:B0348.4t B0348.4t 3894   V: 21007-21090
CDS:B0348.4x B0348.4x 3714   V: 21007-21090
CDS:B0348.4e B0348.4e 4503   V: 21007-21090
CDS:B0348.4d B0348.4d 4539   V: 21007-21090
CDS:B0348.4a B0348.4a 4260   V: 21007-21090
CDS:B0348.4g B0348.4g 4185   V: 21007-21090
CDS:B0348.4i B0348.4i 3942   V: 21007-21090
CDS:B0348.4l B0348.4l 3798   V: 21007-21090
CDS:B0348.4o B0348.4o 4419   V: 21007-21090
CDS:B0348.4p B0348.4p 4212   V: 21007-21090
CDS:B0348.4q B0348.4q 4176   V: 21007-21090
CDS:B0348.4s B0348.4s 4101   V: 21007-21090
CDS:B0348.4w B0348.4w 3921   V: 21007-21090
CDS:B0348.4y B0348.4y 3678   V: 21007-21090

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain