WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00039317 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006438 nrfl-1 C01F6.6 Caenorhabditis elegans

10 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01F6.6d C01F6.6d 1341   IV: 9119100-9119168
CDS:C01F6.6h C01F6.6h 1476   IV: 9119100-9119168
CDS:C01F6.6b C01F6.6b 1827   IV: 9121481-9122260
CDS:C01F6.6f C01F6.6f 1065   IV: 9124806-9124823
CDS:C01F6.6g C01F6.6g 1101   IV: 9126292-9126345
CDS:C01F6.6e C01F6.6e 996   IV: 9127246-9127275
CDS:C01F6.6j C01F6.6j 792   IV: 9127246-9127275
CDS:C01F6.6a C01F6.6a 1404   IV: 9119100-9119168
CDS:C01F6.6c C01F6.6c 1272   IV: 9119100-9119168
CDS:C01F6.6i C01F6.6i 1200   IV: 9119100-9119168

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain