WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00048407 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010079 F55A11.6 F55A11.6 Caenorhabditis elegans
WBGene00014397 F55A11.10 F55A11.10 Caenorhabditis elegans
WBGene00010082 F55A11.11 F55A11.11 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A11.6a F55A11.6a 810   V: 11781123-11781182
CDS:F55A11.6e F55A11.6e 219   V: 11782868-11782909
CDS:F55A11.6b F55A11.6b 657   V: 11781451-11781601
CDS:F55A11.6c F55A11.6c 894   V: 11776902-11776953
CDS:F55A11.6d F55A11.6d 816   V: 11781123-11781182
CDS:F55A11.11 F55A11.11 945   V: 11783430-11783630

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain