WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00049280 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

4 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001996 hpl-2 K01G5.2 Caenorhabditis elegans
WBGene00010363 H04D03.2 H04D03.2 Caenorhabditis elegans
WBGene00195045 W05F2.8 W05F2.8 Caenorhabditis elegans
WBGene00194861 H04D03.6 H04D03.6 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05F2.8b W05F2.8b 273   I: 3362855-3362908
CDS:H04D03.2a H04D03.2a 1899   III: 10439492-10439590
CDS:H04D03.2b H04D03.2b 348   III: 10439492-10439590
CDS:H04D03.6a H04D03.6a 279   III: 10438191-10438415
CDS:H04D03.6b H04D03.6b 285   III: 10438191-10438421
CDS:K01G5.2b K01G5.2b 906   III: 10752324-10752548
CDS:K01G5.2c K01G5.2c 912   III: 10752324-10752554
CDS:W05F2.8a W05F2.8a 399   I: 3362369-3362476

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain