WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00049872 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

4 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005004 spp-19 K04A8.9 Caenorhabditis elegans
WBGene00006665 twk-10 K04A8.4 Caenorhabditis elegans
WBGene00235118 spp-26 K04A8.18 Caenorhabditis elegans
WBGene00023096 K04A8.t3 K04A8.t3 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04A8.4a K04A8.4a 1290   V: 6552348-6552440
CDS:K04A8.18 K04A8.18 396   V: 6558766-6558960
CDS:K04A8.4b K04A8.4b 354   V: 6559536-6559622
CDS:K04A8.4c K04A8.4c 258   V: 6559895-6560060
CDS:K04A8.9 K04A8.9 438   V: 6560228-6560329

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain