WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00054827 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021036 W05F2.4 W05F2.4 Caenorhabditis elegans

10 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05F2.4a W05F2.4a 5847   I: 3375099-3375178
CDS:W05F2.4d W05F2.4d 2616   I: 3375099-3375178
CDS:W05F2.4f W05F2.4f 5907   I: 3375099-3375178
CDS:W05F2.4g W05F2.4g 5772   I: 3375099-3375178
CDS:W05F2.4k W05F2.4k 5736   I: 3375099-3375178
CDS:W05F2.4b W05F2.4b 2532   I: 3375099-3375178
CDS:W05F2.4e W05F2.4e 5982   I: 3375099-3375178
CDS:W05F2.4h W05F2.4h 5946   I: 3375099-3375178
CDS:W05F2.4i W05F2.4i 5811   I: 3375099-3375178
CDS:W05F2.4j W05F2.4j 5871   I: 3375099-3375178

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain