WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00058904 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

9 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044275 nspa-10 Y50E8A.17 Caenorhabditis elegans
WBGene00012294 nspa-8 W06A7.5 Caenorhabditis elegans
WBGene00013887 nspa-5 ZC412.6 Caenorhabditis elegans
WBGene00013888 nspa-3 ZC412.7 Caenorhabditis elegans
WBGene00044274 nspa-7 H12D21.15 Caenorhabditis elegans
WBGene00044272 nspa-4 H12D21.13 Caenorhabditis elegans
WBGene00010377 nspa-1 H12D21.1 Caenorhabditis elegans
WBGene00044273 nspa-6 H12D21.14 Caenorhabditis elegans
WBGene00044271 nspa-2 H12D21.12 Caenorhabditis elegans

9 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50E8A.17 Y50E8A.17 105   V: 14750353-14750457
CDS:W06A7.5 W06A7.5 105   V: 14826948-14827052
CDS:H12D21.13 H12D21.13 105   V: 14884716-14884820
CDS:H12D21.1 H12D21.1 105   V: 14886803-14886907
CDS:H12D21.12 H12D21.12 105   V: 14891082-14891186
CDS:H12D21.14 H12D21.14 105   V: 14889407-14889511
CDS:H12D21.15 H12D21.15 105   V: 14883039-14883143
CDS:ZC412.6 ZC412.6 105   V: 14878348-14878452
CDS:ZC412.7 ZC412.7 105   V: 14880435-14880539

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain