WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00059359 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

9 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003426 msp-19 F36H12.7 Caenorhabditis elegans
WBGene00003448 msp-55 C09B9.6 Caenorhabditis elegans
WBGene00021997 Y59E9AR.1 Y59E9AR.1 Caenorhabditis elegans
WBGene00022005 Y59H11AM.1 Y59H11AM.1 Caenorhabditis elegans
WBGene00003450 msp-57 R13H9.2 Caenorhabditis elegans
WBGene00003446 msp-53 R13H9.4 Caenorhabditis elegans
WBGene00022002 Y59E9AR.7 Y59E9AR.7 Caenorhabditis elegans
WBGene00003468 msp-113 ZK354.4 Caenorhabditis elegans
WBGene00003452 msp-59 ZK354.11 Caenorhabditis elegans

9 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13H9.2 R13H9.2 384   IV: 5062578-5062961
CDS:R13H9.4 R13H9.4 384   IV: 5064678-5065061
CDS:Y59E9AR.7 Y59E9AR.7 393   IV: 5241402-5241794
CDS:Y59E9AR.1 Y59E9AR.1 393   IV: 5249428-5249820
CDS:ZK354.4 ZK354.4 384   IV: 5297962-5298345
CDS:Y59H11AM.1 Y59H11AM.1 384   IV: 8571438-8571821
CDS:C09B9.6 C09B9.6 384   IV: 5055631-5056014
CDS:F36H12.7 F36H12.7 384   IV: 5260589-5260972
CDS:ZK354.11 ZK354.11 384   IV: 5312728-5313111

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain