WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00059507 Remark 
Secondary Identifier 
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

6 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003431 msp-33 R05F9.8 Caenorhabditis elegans
WBGene00003442 msp-49 C34F11.6 Caenorhabditis elegans
WBGene00003470 msp-152 ZK546.6 Caenorhabditis elegans
WBGene00003429 msp-31 R05F9.13 Caenorhabditis elegans
WBGene00003438 msp-45 F58A6.8 Caenorhabditis elegans
WBGene00003452 msp-59 ZK354.11 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05F9.8 R05F9.8 384   II: 4892311-4892694
CDS:ZK546.6 ZK546.6 384   II: 4933027-4933410
CDS:C34F11.6 C34F11.6 384   II: 5194366-5194749
CDS:F58A6.8 F58A6.8 384   II: 5156700-5157083
CDS:R05F9.13 R05F9.13 384   II: 4916179-4916562
CDS:ZK354.11 ZK354.11 384   IV: 5312728-5313111

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain