WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00065400 Genotype  lin-41(ma104); him-5
Phenotype Remark  the defective male tail morphogenesis (precocious over-retraction (Ore) ) of lin-41 (rf) males was not altered by the lin-29 RNAi treatments

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003015 lin-29 W03C9.4 Caenorhabditis elegans

12 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03C9.4a W03C9.4a 1374   II: 11918339-11918546
CDS:W03C9.4b W03C9.4b 1368   II: 11918339-11918546
CDS:W03C9.4c W03C9.4c 954   II: 11918339-11918546
CDS:W03C9.4j W03C9.4j 942   II: 11918339-11918546
CDS:W03C9.4k W03C9.4k 951   II: 11918339-11918546
CDS:W03C9.4l W03C9.4l 963   II: 11918339-11918546
CDS:W03C9.4e W03C9.4e 1362   II: 11918339-11918546
CDS:W03C9.4f W03C9.4f 1365   II: 11918339-11918546
CDS:W03C9.4g W03C9.4g 1371   II: 11918339-11918546
CDS:W03C9.4h W03C9.4h 1377   II: 11918339-11918546
CDS:W03C9.4i W03C9.4i 1383   II: 11918339-11918546
CDS:W03C9.4d W03C9.4d 1356   II: 11918339-11918546

1 Laboratories

Primary Identifier
DF

4 Phenotype

Identifier Name Description
WBPhenotype:0000697 protruding vulva Animals undergo incomplete vulval morphogenesis, resulting in the formation of a single protrusion at the site of the vulva.
WBPhenotype:0000070 male tail morphology variant Animals exhibit variations in the structure or organization of the somatic reproductive components of the posterior segment of the male from that observed in control males. In C. elegans, this region of the male includes the terminal canals of the reproductive tract, the digestive tract, and spicule channels along with the male specific sensilla (ray, post-cloacal, hook and spicule) and extends to the tip of the acellular fan.
WBPhenotype:0000640 egg laying variant Animals exhibit variations in the stage of eggs laid, egg laying cycle, number of eggs or egg laying in response to stimuli compared to control.
WBPhenotype:0000038 exploded through vulva The animal is ruptured at the vulva and displays an extrusion of internal organs at the site of rupture.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027716

0 Strain