WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00072468 Phenotype Remark  RNAi phenotype in lin-35(n2239) worms was reproducibly stronger than those observed in WT (primary screen) and rrf-3(pk1426) (secondary screen) animals.
Remark  candidate lin-35 interacting gene based on results of the secondary screen

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002992 lin-3 F36H1.4 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H1.4a F36H1.4a 1317   IV: 11057814-11057868
CDS:F36H1.4d F36H1.4d 1389   IV: 11057814-11057868
CDS:F36H1.4g F36H1.4g 1395   IV: 11057814-11057868
CDS:F36H1.4f F36H1.4f 1434   IV: 11057814-11057868
CDS:F36H1.4b F36H1.4b 1311   IV: 11057814-11057868
CDS:F36H1.4c F36H1.4c 1272   IV: 11057814-11057868
CDS:F36H1.4e F36H1.4e 1299   IV: 11059299-11059341
CDS:F36H1.4h F36H1.4h 1266   IV: 11057814-11057868

1 Laboratories

Primary Identifier
SV

1 Phenotype

Identifier Name Description
WBPhenotype:0000640 egg laying variant Animals exhibit variations in the stage of eggs laid, egg laying cycle, number of eggs or egg laying in response to stimuli compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029258

1 Strain

WormBase ID
WBStrain00000001