WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00008004 Phenotype Remark  % penetrance range
Remark  PCR product used to make dsRNA was amplified from genomic DNA. Secondary Identifier  PF:GL1_6A3

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000405 cdk-1 T05G5.3 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05G5.3 T05G5.3 999   III: 9747474-9747653

1 Laboratories

Primary Identifier
KK

8 Phenotype

Identifier Name Description
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0001037 sterile progeny Any variation that compromises the reproductive ability of the progeny of an animal.
WBPhenotype:0001177 embryo osmotic pressure sensitive early emb Embryos rupture when placed on a 2% agar pad and covered with a coverslip.
WBPhenotype:0000040 one cell arrest early emb Embryos fail to divide and arrest as one-cell embryos.
WBPhenotype:0001119 cell cycle slow early emb Embryos take longer to divide during the first and second cell divisions.
WBPhenotype:0001176 one cell shape defective early emb One-cell embryos have an altered shape.
WBPhenotype:0001147 polar body defective early emb Polar bodies are abnormal in the inviable one- to four-cell embryo.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005599

1 Strain

WormBase ID
WBStrain00000001