WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00073512 Genotype  eri-1(mg366); lin-15B(n744)
Phenotype Remark  RNAi phenotype was reproducibly stronger in lin-35, or in multiple synMuv B mutants, than in WT, rrf-3 and eri-1. Remark  Group of 31 interacting genes. Genes that displayed strong RNAi phenotypes in lin-35(n2239) and in one or two other synMuv B mutants.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016074 dnsn-1 C24H12.5 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24H12.5b C24H12.5b 1791   II: 406227-406397
CDS:C24H12.5c C24H12.5c 1785   II: 406227-406397
CDS:C24H12.5a C24H12.5a 1302   II: 406227-406397
CDS:C24H12.5d C24H12.5d 1134   II: 406227-406397
CDS:C24H12.5e C24H12.5e 1002   II: 406227-406397

1 Laboratories

Primary Identifier
SV

7 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000697 protruding vulva Animals undergo incomplete vulval morphogenesis, resulting in the formation of a single protrusion at the site of the vulva.
WBPhenotype:0000164 thin Animals exhibit a reduced girth compared to a control animal of the same developmental stage.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0000038 exploded through vulva The animal is ruptured at the vulva and displays an extrusion of internal organs at the site of rupture.
WBPhenotype:0001037 sterile progeny Any variation that compromises the reproductive ability of the progeny of an animal.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029258

0 Strain