WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00106387 Remark  (Table 1) hsp-25 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002023 hsp-25 C09B8.6 Caenorhabditis elegans
WBGene00002146 ipp-5 C09B8.1 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09B8.6b C09B8.6b 618   X: 6034747-6034857
CDS:C09B8.6a C09B8.6a 660   X: 6034747-6034857
CDS:C09B8.6c C09B8.6c 327   X: 6034747-6034857

0 Laboratories

0 Phenotype

3 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00046852

1 Strain

WormBase ID
WBStrain00000001