WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00027035 Genotype  NL4256 rrf-3(pk1426)
Secondary Identifier  Simmer:ZK1151.1:Repeat_b

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006876 vab-10 ZK1151.1 Caenorhabditis elegans

12 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1151.1c ZK1151.1c 14832   I: 11747762-11747801
CDS:ZK1151.1j ZK1151.1j 14799   I: 11747762-11747801
CDS:ZK1151.1d ZK1151.1d 10182   I: 11764837-11770713
CDS:ZK1151.1h ZK1151.1h 10275   I: 11764837-11770713
CDS:ZK1151.1b ZK1151.1b 10716   I: 11764837-11770713
CDS:ZK1151.1i ZK1151.1i 4494   I: 11773361-11773513
CDS:ZK1151.1a ZK1151.1a 11085   I: 11764837-11770713
CDS:ZK1151.1e ZK1151.1e 9936   I: 11764837-11770713
CDS:ZK1151.1f ZK1151.1f 9933   I: 11764837-11770713
CDS:ZK1151.1k ZK1151.1k 14460   I: 11747762-11747801
CDS:ZK1151.1l ZK1151.1l 15180   I: 11747762-11747801
CDS:ZK1151.1m ZK1151.1m 14841   I: 11747762-11747801

1 Laboratories

Primary Identifier
NL

5 Phenotype

Identifier Name Description
WBPhenotype:0000697 protruding vulva Animals undergo incomplete vulval morphogenesis, resulting in the formation of a single protrusion at the site of the vulva.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000644 paralyzed Animals do not move and are not responsive to external mechanical stimulation.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0000038 exploded through vulva The animal is ruptured at the vulva and displays an extrusion of internal organs at the site of rupture.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00006395

0 Strain