WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00085221 Genotype  rrf-3; SYD-9::GFP
Phenotype Remark  Some animals displayed a starved-looking body morphology. Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation (ZK867.1a).
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044068 syd-9 ZK867.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK867.1f ZK867.1f 1665   X: 7218468-7218605
CDS:ZK867.1d ZK867.1d 1359   X: 7218468-7218605
CDS:ZK867.1b ZK867.1b 408   X: 7223918-7223941
CDS:ZK867.1c ZK867.1c 1614   X: 7218468-7218605
CDS:ZK867.1e ZK867.1e 1308   X: 7218468-7218605

1 Laboratories

Primary Identifier
ZM

3 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000646 sluggish Animals move more slowly compared with control animals.
WBPhenotype:0000072 body morphology variant Animals exhibit variations in the form, structure or composition of any portion of their anatomy between the head and the tail compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027711

0 Strain