WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00065976 Remark  lpd-2 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003059 lpd-2 C48E7.3 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48E7.3 C48E7.3 957   I: 6253701-6253826

0 Laboratories

3 Phenotype

Identifier Name Description
WBPhenotype:0000164 thin Animals exhibit a reduced girth compared to a control animal of the same developmental stage.
WBPhenotype:0001261 pale Animals show deficiencies in chroma resulting in increased translucency.
WBPhenotype:0000055 early larval arrest Larvae arrest during early larval development. In C. elegans, this occurs during the L1 or L2 stages of larval development.

3 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000634 pharyngeal pumping variant Any variation in the contraction and relaxation movements of the pharyngeal muscle that mediate feeding in nematodes compared to control.
WBPhenotype:0000650 defecation variant Animals exhibit variations in the processes involved in eliminating gut contents compared to control animals. In C. elegans the sequence of events during defecation includes posterior body contraction (pBoc), relaxation, anterior body contraction (aBoc), expulsion of gut contents by enteric muscle contraction (Emc) and opening of anus (Exp), and intercycle period (Wormatlas).
WBPhenotype:0000706 gut granule biogenesis reduced Animals lack birefringent containing compartments in embryonic intestinal cells; however, these compartments appear in adult stages.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005707

0 Strain