WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00082083 Genotype  dat-1::gfp; rrf-3(pk1426)
Phenotype Remark  Worms exhibited resistance to Mn2+(manganese ion)-induced dopamine neuronal degradation after RNAi of smf-1

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004876 smf-1 K11G12.4 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11G12.4a K11G12.4a 1689   X: 6719800-6719943

1 Laboratories

Primary Identifier
RJ

2 Phenotype

Identifier Name Description
WBPhenotype:0001904 manganese toxicity resistant Animals fail to exhibit toxicity to the concentration of manganese that elicits a response in control animals. Alternatively, animals require increased concentration or longer exposure to this compound to elicit the response compared to control animals. In C. elegans toxic responses to manganese include dopamine (DA) neuron neurodegeneration.
WBPhenotype:0000636 neuron degeneration variant Any variation in the ability of neurons to undergo a dramatic decrease in cell volume, collapse of the vacuoles and processes, and complete disintegration of the plasma membrane and most organelles under conditions that ellicit this response in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00035259

0 Strain