WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00113377 Phenotype Remark  nubp-1 RNAi resulted in abnormal cilia morphology in silenced AWB neurons, compared to control silencing from a typical "two-pronged fork" shaped cilia of AWB in control cells to "winged-like" structures in nubp-1-silenced cells.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008664 nubp-1 F10G8.6 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10G8.6 F10G8.6 942   I: 10046450-10046629

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0000615 cilia morphology variant Animals exhibit variations in the structure or organization of the microtubule-based dendritic projections extending from the cell body, compared to that observed in control animals. In C. elegans, cilia are classified as channel cilia or wing cilia depending on their placement within the sensillum. Channel cilia of control animals are cylindrical, extend into the sensillum pore and are exposed to the outside. Wing cilia of control animals vary in shape, are embedded in the sensillum sheath cell and are not typically refractory to dyes indicating exposure to the outside.
WBPhenotype:0000884 AWB morphology variant Animals exhibit variations in the structure or organization of either of a set of two ciliated wing neurons, AWBL or AWBR, of the amphid sensilla, compared to that observed in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00043889

1 Strain

WormBase ID
WBStrain00005248