WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00091342 Genotype  unc-55(e1170); "irx-1 sense": [Pttr-39::irx-1(sense); unc-119(+)]; "irx-1 antisense": [Pttr-39::irx-1(antisense); Punc-25::mCherry]
Phenotype Remark  Synaptic remodeling of DD motor neurons is delayed in irx-1 RNAi animals compared to controls, as determined by the number of SNB-1::GFP puncta (marking GABAergic neuro-muscular junctions) in the dorsal nerve cord of L1 and L2 larvae. Remark  (Figure 8) irx-1 csRNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007984 irx-1 C36F7.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36F7.1 C36F7.1 1134   I: 9537119-9537198

1 Laboratories

Primary Identifier
NC

1 Phenotype

Identifier Name Description
WBPhenotype:0000616 synapse morphology variant Animals display variations in the appearance of the subcellular junctional structure composed of a presynaptic terminal directly opposite the post-synaptic target and separated by a synaptic cleft.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000816 neuron development variant Variations in the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040363

0 Strain