WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110215 Phenotype Remark  "In addition to haf-1, the mtUPR transcriptional co-activator gene dve-1 [10] was necessary for doxycycline-mediated hypoxia protection (Figure 2C)."
Remark  (Figure 2C) dve-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022861 dve-1 ZK1193.5 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1193.5a ZK1193.5a 1407   X: 427687-427770
CDS:ZK1193.5d ZK1193.5d 774   X: 427687-427770
CDS:ZK1193.5e ZK1193.5e 1398   X: 427687-427770
CDS:ZK1193.5c ZK1193.5c 783   X: 427687-427770

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002423 hypoxia response variant Animals exhibit variations in response to hypoxia, low oxygen conditions, compared to controls.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00048404

0 Strain