WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00079040 Phenotype Remark  Reported as data-not-shown
Remark  Exact sequence used for pal-1 RNAi not stated by authors, Ahringer laboratory clone used for curation. Exact sequence used for med-1/2 RNAi not stated by authors, spliced coding region sequence of med-1 gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003180 med-1 T24D3.1 Caenorhabditis elegans
WBGene00003181 med-2 K04C2.6 Caenorhabditis elegans
WBGene00003912 pal-1 C38D4.6 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38D4.6b C38D4.6b 807   III: 4805211-4805253
CDS:K04C2.6 K04C2.6 525   III: 6884503-6885027
CDS:C38D4.6a C38D4.6a 813   III: 4805211-4805253
CDS:C38D4.6c C38D4.6c 669   III: 4805211-4805253
CDS:T24D3.1 T24D3.1 525   X: 12430609-12431133

1 Laboratories

Primary Identifier
JR

1 Phenotype

Identifier Name Description
WBPhenotype:0001597 muscle missing Any variation that results in a fewer than control number of muscle cells.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004636

0 Strain