WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00114169 Phenotype Remark  Comma arrest, cell fate specification and/or positioning defect, Cells "leak" out of the posterior
Remark  (Table S2) pal-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003912 pal-1 C38D4.6 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38D4.6b C38D4.6b 807   III: 4805211-4805253
CDS:C38D4.6a C38D4.6a 813   III: 4805211-4805253
CDS:C38D4.6c C38D4.6c 669   III: 4805211-4805253

0 Laboratories

3 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0008001 embryonic cell fate specification variant Any variation in the processes that govern acquisition of particular cell fates in the embryo, from the time of zygote formation until hatching compared to control.
WBPhenotype:0000367 comma arrest emb Cessation of development during the middle stage in embryogenesis of the worm in which the embryo is slightly folded within the eggshell (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00056424

1 Strain

WormBase ID
WBStrain00047121