WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00106204 Phenotype Remark  RNAi of pbo-1 resulted in accumulated NHX-2 in the cytoplasm rather than at the membrane as observed with NHX-2 antibody staining. NHX-2 antibody bound robustly to a target in the apical membrane of the intestine in wild type.
Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003941 pbo-1 Y71H2AL.1 Caenorhabditis elegans
WBGene00022165 Y71H2AL.2 Y71H2AL.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H2AL.1 Y71H2AL.1 591   III: 2681554-2681607
CDS:Y71H2AL.2 Y71H2AL.2 264   III: 2686890-2686940

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001403 antibody subcellular localization variant Any variation in the placement of a protein, as detected by antibody staining, within in a cell or cellular compartment compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00048801

0 Strain