WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00087581 Genotype  itIs153[pie-1::GFP::PAR-2]
Phenotype Remark  par-5(RNAi) embryos maintain GFP:PAR-2 (n=5) at the cortex from pronuclear formation through cleavage. During the period that GFP:PAR-6 decreased in the smooth zone, authors did not observe a reproducible increase in GFP:PAR-2. Occasionally they observed patches of stronger or lower GFP:PAR-2 fluorescence in certain areas of the cortex, but these patches were transient and did not appear in a predictable pattern. Remark  paper remark: Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003920 par-5 M117.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M117.2b M117.2b 381   IV: 11820991-11821284
CDS:M117.2a M117.2a 747   IV: 11820991-11821284

1 Laboratories

Primary Identifier
JH

1 Phenotype

Identifier Name Description
WBPhenotype:0000961 pattern of transgene expression variant Any variation in the cellular or subcellular pattern of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005735

0 Strain