WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00087582 Genotype  axIs1137[pie-1::GFP::PAR-6]
Phenotype Remark  par-5(RNAi) embryos maintain GFP:PAR-6 (n=9) at the cortex from pronuclear formation through cleavage. A reproducible reduction in GFP:PAR-6 fluorescence was observed in the posterior when ruffling ceased in that area. This reduction, however, appeared later and was not as pronounced as in wild type, with detectable levels of GFP:PAR-6 remaining in the region. After pseudocleavage, GFP:PAR-6 reappeared uniformly throughout all the cortex. Remark  paper remark: Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003920 par-5 M117.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M117.2b M117.2b 381   IV: 11820991-11821284
CDS:M117.2a M117.2a 747   IV: 11820991-11821284

1 Laboratories

Primary Identifier
JH

1 Phenotype

Identifier Name Description
WBPhenotype:0000961 pattern of transgene expression variant Any variation in the cellular or subcellular pattern of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005735

0 Strain