WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00072717 Genotype  lin-35(n2239)
Phenotype Remark  RNAi phenotype in lin-35(n2239) worms was reproducibly stronger than those observed in WT (primary screen) and rrf-3(pk1426) (secondary screen) animals. Remark  candidate lin-35 interacting gene based on results of the secondary screen

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012458 ash-2 Y17G7B.2 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17G7B.2a Y17G7B.2a 1713   II: 11980475-11980545
CDS:Y17G7B.2e Y17G7B.2e 1722   II: 11980475-11980545
CDS:Y17G7B.2b Y17G7B.2b 1719   II: 11980475-11980545
CDS:Y17G7B.2d Y17G7B.2d 1728   II: 11980475-11980545

1 Laboratories

Primary Identifier
SV

3 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000697 protruding vulva Animals undergo incomplete vulval morphogenesis, resulting in the formation of a single protrusion at the site of the vulva.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029258

0 Strain