WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00072762 Genotype  rrf-3(pk1426)
Phenotype Remark  RNAi phenotype in lin-35(n2239) worms was reproducibly stronger than those observed in WT (primary screen) and rrf-3(pk1426) (secondary screen) animals. Remark  candidate lin-35 interacting gene based on results of the secondary screen
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021921 rbm-39 Y55F3AM.3 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.3c Y55F3AM.3c 1308   IV: 1015475-1015993
CDS:Y55F3AM.3a Y55F3AM.3a 1743   IV: 1012788-1012850

1 Laboratories

Primary Identifier
SV

3 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000697 protruding vulva Animals undergo incomplete vulval morphogenesis, resulting in the formation of a single protrusion at the site of the vulva.
WBPhenotype:0000038 exploded through vulva The animal is ruptured at the vulva and displays an extrusion of internal organs at the site of rupture.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029258

0 Strain