WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00070945 Genotype  HIM-4::GFP
Phenotype Remark  In wild-type L4 larvae, the uterine and vulval lumen are separated by a thin laminar process formed by the uterus seam cell (utse) syncytium; However in egl-43i animals no utse was visible, and a thick layer of tissue remained between the uterus and vulval tissue.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001207 egl-43 R53.3 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R53.3b R53.3b 969   II: 9960333-9960485
CDS:R53.3a R53.3a 1632   II: 9955186-9955305

1 Laboratories

Primary Identifier
AH

3 Phenotype

Identifier Name Description
WBPhenotype:0000697 protruding vulva Animals undergo incomplete vulval morphogenesis, resulting in the formation of a single protrusion at the site of the vulva.
WBPhenotype:0001652 anchor cell invasion variant Any variation in the process by which the gonad anchor cell makes contact with vulval cells in order to create a uterine-vulval connection. In C. elegans, this includes the loss of the basement membranes between these cells and the crossing of the basolateral portion of the anchor cell through this gap.
WBPhenotype:0000283 vulva uterus connection defective Animals exhibit defects in the continuity of lumen between the vulva and uterus compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00030769

0 Strain