WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00070944 Phenotype Remark  observed the defect in invasion using MitoTracker to stain the basal lamina and observe its persistence

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001207 egl-43 R53.3 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R53.3b R53.3b 969   II: 9960333-9960485
CDS:R53.3a R53.3a 1632   II: 9955186-9955305

1 Laboratories

Primary Identifier
AH

2 Phenotype

Identifier Name Description
WBPhenotype:0000697 protruding vulva Animals undergo incomplete vulval morphogenesis, resulting in the formation of a single protrusion at the site of the vulva.
WBPhenotype:0001652 anchor cell invasion variant Any variation in the process by which the gonad anchor cell makes contact with vulval cells in order to create a uterine-vulval connection. In C. elegans, this includes the loss of the basement membranes between these cells and the crossing of the basolateral portion of the anchor cell through this gap.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000220 vulva cell fate specification variant Any aberrancy in the processes that govern acquisition of vulval cell fates compared to control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00030769

0 Strain