WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00065970 Phenotype Remark  L1 and L2
Remark  Authors state most strains used in this work carry the him-5(e1490) mutation. F1 progenies generated 4 hours after injection were scored
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023405 sor-1 ZK1236.3 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1236.3a ZK1236.3a 2442   III: 8418168-8418173
CDS:ZK1236.3b ZK1236.3b 2433   III: 8419208-8419365

1 Laboratories

Primary Identifier
HZ

6 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0000697 protruding vulva Animals undergo incomplete vulval morphogenesis, resulting in the formation of a single protrusion at the site of the vulva.
WBPhenotype:0001355 gonad morphology variant Variations in the form or composition of a specialized tissue of the reproductive tract that produces the male or female gametes compared to control (Wormatlas).
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000057 early larval lethal Animals die during early larval development. In C.elegans, this occurs during the L1- L2 larval stages of the life cycle.
WBPhenotype:0000812 germ cell development variant Variations in the progression of the immature germ cell over time, from its formation from precursors to the mature structure (gamete) compared to control.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001403 antibody subcellular localization variant Any variation in the placement of a protein, as detected by antibody staining, within in a cell or cellular compartment compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027128

0 Strain