WormMine: RNAi WBRNAi00101435

• WormBase ID: WBRNAi00101435
• Genotype: rde-1(ne219)/+; qIs56 [lag-2::GFP] (marker for the distal tip cell)
• Phenotype Remark: pop-1(RNAi) animals have no gonadal elongation and no bright lag-2::GFP expression in the gonad (unlike wild type). Somatic gonadal cells are aberrantly arranged around the gonadal periphery.
• Remark: (Figure 3C) zygotic pop-1 RNAi (see treatment details). Authors report using genomic sequence of gene as template DNA for dsRNA sequence. Entire genomic sequence used for curation.

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Data Sets

• WormBaseAcedbConverter

2 Inhibits Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00004077	pop-1	W10C8.2	Caenorhabditis elegans
WBGene00220126	W10C8.17	W10C8.17	Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:W10C8.2	W10C8.2	1317	I: 2823468-2823937

1 Laboratories

Primary Identifier
JK

3 Phenotype

Identifier	Name	Description
WBPhenotype:0001278	transgene expression reduced	Any decrease in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0000691	gonad development variant	Variations in the progression of the organ that produces gametes over time, from its formation to the mature structure compared to control.
WBPhenotype:0001355	gonad morphology variant	Variations in the form or composition of a specialized tissue of the reproductive tract that produces the male or female gametes compared to control (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author	Title	Year	Journal	Volume	Pages	PubMed ID
						WBPaper00005116

0 Strain