WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00082705 Phenotype Remark  Underproliferation is severe.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004909 snf-10 Y32F6A.2 Caenorhabditis elegans
WBGene00012528 pap-1 Y32F6A.3 Caenorhabditis elegans
WBGene00012527 set-22 Y32F6A.1 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y32F6A.1 Y32F6A.1 1032   V: 10437016-10437136
CDS:Y32F6A.2 Y32F6A.2 2022   V: 10438366-10438461
CDS:Y32F6A.3 Y32F6A.3 1968   V: 10442117-10442341

1 Laboratories

Primary Identifier
OP

4 Phenotype

Identifier Name Description
WBPhenotype:0000684 fewer germ cells Germ cell populations are reduced compared to control animals.
WBPhenotype:0000290 sperm absent Animals lack fully specialized male gametes that are competent for fertilization.
WBPhenotype:0000291 no oocytes Hermaphrodites lack fully specialized female gametes that are competent for fertilization.
WBPhenotype:0001028 nuclear appearance variant The morphological appearance of nuclei differs from control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036429

0 Strain