WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00078895 Phenotype Remark  No ovulations were detected in these animals.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002173 itr-1 F33D4.2 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D4.2a F33D4.2a 8679   IV: 7675174-7675252
CDS:F33D4.2d F33D4.2d 8511   IV: 7677568-7677581
CDS:F33D4.2g F33D4.2g 5142   IV: 7681425-7681468
CDS:F33D4.2e F33D4.2e 8574   IV: 7681425-7681468
CDS:F33D4.2f F33D4.2f 8541   IV: 7681425-7681468
CDS:F33D4.2h F33D4.2h 8604   IV: 7681425-7681468

1 Laboratories

Primary Identifier
VP

6 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0000651 constipated Animals exhibit delayed or infrequent passage and/or expulsion of fecal matter.
WBPhenotype:0000164 thin Animals exhibit a reduced girth compared to a control animal of the same developmental stage.
WBPhenotype:0000666 ovulation variant Any variation that disrupts the release of a mature oocyte into the spermatheca (for subsequent fertilization), compared to control.
WBPhenotype:0000668 endomitotic oocytes Any variation that results in the presence of mature oocytes with distended polyploid nuclei. In C. elegans, such oocytes mature and exit diakinesis, but are often not properly ovulated or fertilized.
WBPhenotype:0001200 gonad sheath contraction rate reduced Basal contraction rate and or peak contraction rate of the gonadal sheath is reduced relative to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024307

0 Strain