WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00072272 Genotype  lin-35(n2239)
Phenotype Remark  RNAi phenotype in lin-35(n2239) worms was reproducibly stronger than those observed in WT (primary screen) and rrf-3(pk1426) (secondary screen) animals. Remark  candidate lin-35 interacting gene based on results of the secondary screen

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001773 gst-25 F37F2.3 Caenorhabditis elegans
WBGene00004969 spe-15 F47G6.4 Caenorhabditis elegans
WBGene00023055 F47G6.t1 F47G6.t1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F37F2.3 F37F2.3 627   I: 1451137-1451540
CDS:F47G6.4a F47G6.4a 3660   I: 1446666-1446947
CDS:F47G6.4b F47G6.4b 1629   I: 1454469-1454750
CDS:F47G6.4c F47G6.4c 1095   I: 1460278-1460286

1 Laboratories

Primary Identifier
SV

2 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029258

0 Strain