WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00072714 Genotype  lin-35(n2239)
Phenotype Remark  RNAi phenotype in lin-35(n2239) worms was reproducibly stronger than those observed in WT (primary screen) and rrf-3(pk1426) (secondary screen) animals. Remark  candidate lin-35 interacting gene based on results of the secondary screen

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004203 swsn-1 Y113G7B.23 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y113G7B.23a Y113G7B.23a 2370   V: 20239859-20240007
CDS:Y113G7B.23e Y113G7B.23e 1560   V: 20239859-20240007
CDS:Y113G7B.23c Y113G7B.23c 2379   V: 20239859-20240016
CDS:Y113G7B.23h Y113G7B.23h 1350   V: 20239859-20240016
CDS:Y113G7B.23f Y113G7B.23f 1569   V: 20239859-20240016
CDS:Y113G7B.23d Y113G7B.23d 2067   V: 20239859-20240016
CDS:Y113G7B.23b Y113G7B.23b 2058   V: 20239859-20240007
CDS:Y113G7B.23g Y113G7B.23g 1341   V: 20239859-20240007

1 Laboratories

Primary Identifier
SV

5 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000032 sick Animals exhibit some combination of abnormal features relating to size, movement, body integrity, pigmentation, viability, fertility etc.
WBPhenotype:0000164 thin Animals exhibit a reduced girth compared to a control animal of the same developmental stage.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029258

0 Strain