WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00064639 Remark  Genetic enhancer interactions are identified by comparing RNAi phenotypes of library genes in wild-type animals with those seen in mutant worms carrying a defined lesion in a single query gene; a genetic interaction between a query gene and a library gene is observed if the phenotype of the combined perturbation is greater than the sum of the two individual perturbations.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006805 unc-73 F55C7.7 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55C7.7a F55C7.7a 7467   I: 3999348-3999523
CDS:F55C7.7f F55C7.7f 2904   I: 3999348-3999523
CDS:F55C7.7d F55C7.7d 1659   I: 4002331-4002508
CDS:F55C7.7g F55C7.7g 1917   I: 4002331-4002508
CDS:F55C7.7i F55C7.7i 6423   I: 4002593-4002832
CDS:F55C7.7c F55C7.7c 2787   I: 3999348-3999523
CDS:F55C7.7e F55C7.7e 1902   I: 4002331-4002508
CDS:F55C7.7h F55C7.7h 2772   I: 3999348-3999523

1 Laboratories

Primary Identifier
ANF

1 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027756

1 Strain

WormBase ID
WBStrain00026501