WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00064656 Remark  Genetic enhancer interactions are identified by comparing RNAi phenotypes of library genes in wild-type animals with those seen in mutant worms carrying a defined lesion in a single query gene; a genetic interaction between a query gene and a library gene is observed if the phenotype of the combined perturbation is greater than the sum of the two individual perturbations.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003395 mom-2 F38E1.7 Caenorhabditis elegans
WBGene00006759 unc-22 ZK617.1 Caenorhabditis elegans

10 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK617.1e ZK617.1e 19308   IV: 11973651-11973746
CDS:ZK617.1c ZK617.1c 19860   IV: 11973651-11973746
CDS:ZK617.1d ZK617.1d 19359   IV: 11973651-11973746
CDS:ZK617.1b ZK617.1b 21477   IV: 11973651-11973746
CDS:ZK617.1h ZK617.1h 21429   IV: 11973651-11973746
CDS:ZK617.1i ZK617.1i 21402   IV: 11973651-11973746
CDS:F38E1.7 F38E1.7 1089   V: 8356098-8356174
CDS:ZK617.1a ZK617.1a 20520   IV: 11973651-11973746
CDS:ZK617.1f ZK617.1f 20784   IV: 11973651-11973746
CDS:ZK617.1g ZK617.1g 20547   IV: 11973651-11973746

1 Laboratories

Primary Identifier
ANF

1 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027756

1 Strain

WormBase ID
WBStrain00028995