WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00064747 Remark  Genetic enhancer interactions are identified by comparing RNAi phenotypes of library genes in wild-type animals with those seen in mutant worms carrying a defined lesion in a single query gene; a genetic interaction between a query gene and a library gene is observed if the phenotype of the combined perturbation is greater than the sum of the two individual perturbations.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004036 plc-1 F31B12.1 Caenorhabditis elegans

12 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1c F31B12.1c 5688   X: 10795070-10795207
CDS:F31B12.1b F31B12.1b 5607   X: 10796447-10796655
CDS:F31B12.1h F31B12.1h 10515   X: 10796447-10796655
CDS:F31B12.1j F31B12.1j 10464   X: 10796447-10796655
CDS:F31B12.1l F31B12.1l 10494   X: 10796447-10796655
CDS:F31B12.1a F31B12.1a 5697   X: 10795950-10796051
CDS:F31B12.1d F31B12.1d 10656   X: 10796447-10796655
CDS:F31B12.1e F31B12.1e 5637   X: 10796447-10796655
CDS:F31B12.1f F31B12.1f 5661   X: 10796447-10796655
CDS:F31B12.1g F31B12.1g 10485   X: 10796447-10796655
CDS:F31B12.1i F31B12.1i 10635   X: 10796447-10796655
CDS:F31B12.1k F31B12.1k 10665   X: 10796447-10796655

1 Laboratories

Primary Identifier
ANF

1 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027756

1 Strain

WormBase ID
WBStrain00008024