WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00073619 Genotype  lin-15B(n744)
Phenotype Remark  RNAi phenotype was reproducibly stronger in lin-35, or in multiple synMuv B mutants, than in WT, rrf-3 and eri-1. Remark  Group of 31 interacting genes. Genes that displayed strong RNAi phenotypes in lin-35(n2239) and in one or two other synMuv B mutants.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004804 skn-1 T19E7.2 Caenorhabditis elegans
WBGene00020585 clec-178 T19E7.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19E7.2d T19E7.2d 672   IV: 5651764-5651840
CDS:T19E7.2c T19E7.2c 1602   IV: 5651764-5651840
CDS:T19E7.1 T19E7.1 537   IV: 5653987-5654142
CDS:T19E7.2a T19E7.2a 1872   IV: 5651764-5651840
CDS:T19E7.2b T19E7.2b 933   IV: 5651764-5651840

1 Laboratories

Primary Identifier
SV

2 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0000032 sick Animals exhibit some combination of abnormal features relating to size, movement, body integrity, pigmentation, viability, fertility etc.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029258

0 Strain