WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00003575 Secondary Identifier  JA:F33D11.9

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018006 gpaa-1 F33D11.9 Caenorhabditis elegans

10 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D11.9j F33D11.9j 300   I: 5857740-5858039
CDS:F33D11.9a F33D11.9a 849   I: 5857740-5858124
CDS:F33D11.9f F33D11.9f 690   I: 5857740-5858124
CDS:F33D11.9e F33D11.9e 1824   I: 5857740-5858124
CDS:F33D11.9d F33D11.9d 1983   I: 5857740-5858124
CDS:F33D11.9b F33D11.9b 2031   I: 5857740-5858124
CDS:F33D11.9c F33D11.9c 1872   I: 5857740-5858124
CDS:F33D11.9g F33D11.9g 663   I: 5857740-5858124
CDS:F33D11.9h F33D11.9h 504   I: 5857740-5858124
CDS:F33D11.9i F33D11.9i 519   I: 5857740-5858124

1 Laboratories

Primary Identifier
JA

0 Phenotype

8 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0001037 sterile progeny Any variation that compromises the reproductive ability of the progeny of an animal.
WBPhenotype:0000049 postembryonic development variant Any variation in the progression of an animal over time, from hatching to adulthood, compared to control.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004402

0 Strain