WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00015036 Secondary Identifier  JA:F45F2.2

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

7 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001878 his-4 T10C6.11 Caenorhabditis elegans
WBGene00001882 his-8 F45F2.12 Caenorhabditis elegans
WBGene00001894 his-20 K06C4.4 Caenorhabditis elegans
WBGene00001896 his-22 K06C4.12 Caenorhabditis elegans
WBGene00001913 his-39 F45F2.2 Caenorhabditis elegans
WBGene00001926 his-52 F07B7.4 Caenorhabditis elegans
WBGene00001928 his-54 F07B7.11 Caenorhabditis elegans

7 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45F2.12 F45F2.12 372   V: 8532715-8533086
CDS:F45F2.2 F45F2.2 204   V: 8536513-8536716
CDS:F07B7.11 F07B7.11 372   V: 8853006-8853377
CDS:K06C4.12 K06C4.12 372   V: 8892559-8892930
CDS:T10C6.11 T10C6.11 372   V: 16040144-16040515
CDS:F07B7.4 F07B7.4 372   V: 8850464-8850835
CDS:K06C4.4 K06C4.4 372   V: 8895101-8895472

1 Laboratories

Primary Identifier
JA

0 Phenotype

8 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0001037 sterile progeny Any variation that compromises the reproductive ability of the progeny of an animal.
WBPhenotype:0000049 postembryonic development variant Any variation in the progression of an animal over time, from hatching to adulthood, compared to control.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005654

0 Strain